Installing Let’s Encrypt Free SSL/TLS Certificate in 2 Minutes with Certbot, Spending Hours Making it Work with Cloudflare

Orange Pi Development Boards

I’ve been using an SSL certificate to the download subdomain of this blog running ownCloud for about 2 years, but recently my free StartSSL certificate expired, and I had troubles to renew it, and I also received an email from Google telling me that “Starting October 2017, Chrome (version 62) will show a “NOT SECURE” warning when users enter text in a form on an HTTP page, and for all HTTP pages in Incognito mode”.  So I decide to use free LetsEncrypt SSL/TLS certificates to replace the one in the download subdomain, as well as this main blog. Such SSL/TLS certificates are also very useful for the IoT gateways many of use have started using, and I found it’s even simpler than install a self-signed certificate, so there’s no reason to use those anymore.

The easiest way to install Let’s Encrypt certificate is by using Certbot with instructions for various web server or hosting platforms (nginx, apache, pleask, haproxy…) and BSD & Linux based operating systems. I’m using Ubuntu 14.04 trusty with nginx, so the instructions below are for this combination, and it took me around 2 to 3 minutes in my VPS to have the SSL/TLS certificate installed, and up and running.

Cerbot installation:

Certificate installation for nginx on subdomain:

Done! I could now go to with my freshly installed certificate. That’s it for the 2-minute installation procedure, but as with such quick and easy procedure, you can always add “wasting countless hours” steps to it, and that’s what I did, by first checking out the Qualys SSL Report as recommended in the output of the terminal above.

Grade C, not good. The certificate is mostly there to protect my login credentials, as I don’t have any important private data in that server, but let’s still try to improve this. The most critical issue is that the server is vulnerable to the POODLE attack, but luckily Nginx guys have a fix: disable SSLv3.

I just had to change a single line in the server block of the domain configuration file in /etc/nginx/sites-enabled directory to only allow for TLS connections:

I then reload the configuration with:

Ran the SSL report again, and I improved to Grade B. That was easy.

After Disabling SSLv3

The second problem is about “weak Diffle Hellman (DH) key exchange parameters”, but again there are solutions.

First I had to create a dhparams.pem file with the following command line:

then edit the domain configuration file in /etc/nginx/sites-enabled/ directory by adding the following in the server block:

After reloading nginx configuration, I had a grade A with no other problems to solve.

I checked two banking websites, and they got A-, two online shops (GearBest and GeekBuying), and they achieved Grade B, so when you share your credit card info, you are at risk, albeit likely a limited risk. Considering it’s so easy to fix some of the issues, they should do it, and I informed both companies.

Let’s Encrypt certificates expires just after 90 day, so you may want to setup automatic renewal. First check renewal works with a dry run:

If there are no errors, you can setup a cron or systemd job to run the following command regularly:

I then tried with some other domains, and I got a TLS handshake failure:

The reason was Cloudflare intercepting traffic, so I had to pause Cloudflare before running certbot, and installation went just fine, and I could use my website without any problem, until I resumed Cloudflare support, and got “too many redirects”. I started to look for solutions with come fairly complicated instructions for Certbot + Apache + Cloudflare. After a few hours trying to find a solution, I discovered my assumption that if I enable an SSL certificate on my side, I should just disable SSL in Cloudflare… Big mistake! After setting Cloudflare SSL to Full (Strict) it worked again, although I eventually just to set it to Full because Let’s Encrypt wildcard SSL certificate are not yet supported, but will be in January 2018.

So the TLS connection was working, but I tried a dry run to renew the certificate, and every domain managed through Cloudflare would fail… That’s when the “complicated instructions” above came handy… So I first installed Certbot Cloudflare plugin/add-on:

Created /etc/letscrypt/cloudflare.ini file with your email, and API key in Cloudflare (Global API Key)

and generated new certificates using that plugin:

This should overwrite the two files used for the certificates previously created with nginx option: /etc/letsencrypt/live/
& /etc/letsencrypt/live/  So normally, you don’t even need to change your nginx configuration after that, but if for some reasons the path has changed, you should edit your file in /etc/nginx/sites-enabled/ and updated the paths.

Finally, I tried the dry run to update the certificate and it worked, so I created a cron job to renew the certificates every month:

If your website is also designed to be compatible with https, then your job is done, if not, then you’ll have some work to do to remove all hardcoded http calls from your websites with the help of the developer console in web browsers such as Chrome or Firefox.

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32 Comments on "Installing Let’s Encrypt Free SSL/TLS Certificate in 2 Minutes with Certbot, Spending Hours Making it Work with Cloudflare"

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Well done!

A very nice tool to verify your TLS / HTTPS setup in detail: testssl. See


PS: one step beyond is disabling TLS1; it was defined in 1999, and it is considered unsafe by certain people. So I made my own mini-website TLS1.2-only. That works, although very old clients can’t connect anymore, for example IE8 on XP and Win7 … which is OK for me. 🙂


Can the same certificate be used for same address but different ports? Example apache on 80, nodered on 1880, webmin on 10000,etc

Marcin Juszkiewicz

You can go to A+ even ;D


Nice writeup @cnxsoft. For those who don’t have a similar setup, the Mozilla wiki has an excellent guide for securing HTTPS as best as possible on different platforms (and for different clients):
They also have a very useful tool which will auto-generate a secure config based on os, web server and target clients.


Yes, a certificate is tied to the servers CN – Common Name (hostname), ports don’t factor into it. If you’re hosting multiple hostnames on the same server, you can use Server Name Identification (SNI). This will let you host them all on 443 and the server will figure out which certificate to respond with. Some very old browsers don’t support it but they’ll also have busted SSL/TLS implementations and users should really upgrade anyway.

Peter Steenbergen

I just read this for my cloudkey the other day!

Might be usefull as alternative for CertBot


So that was the source of all the 503’s I was getting on one of my browsers while trying to access cnx over the past days.. I had started suspecting the sanity of that one browser : )


I can no longer access your site from WinXP and last Chrome based Opera that supports it. It works on firefox. Any help for Opera?

“This site can’t provide a secure connection uses an unsupported protocol.
The client and server don’t support a common SSL protocol version or cipher suite. This is likely to be caused when the server needs RC4, which is no longer considered secure.”


An other tool for Firefox :


cnxsoft :

Does not work û IE 6.0, IE 8.0

Opera and Maxthon also don’t work.

I donÆt have data for Opera, but make sure you have Opera 36 since itÆs the latest version that works with Windows XP.

I do have Opera 36.0.2130.65, the last available.

Maxthon (webkit based) is the last browser still receiving updates on WinXP. Unfortunately even after today’s updates it does not differ much:
“Invalid certificate
This site’s certificate has expired or has been issued for a different website’s address.
This problem may indicate an attempt to intercept the data between you and a remote server.
Please check whether the URL in the address bar is correct.

I do not have “net nanny”.



This is SOoo STUPID !!

” for example IE8 on XP and Win7 … which is OK for me ”
” Do you have any specific reasons to still use Windows XP? ”

Well, it maybe ok for you, but what about those millions of people in Africa and other poor regions that have to use the garbage (old computers) we – so called civilized world – dispose to them???
Grow up !


I fully understand your position, but that means that I will check your blog much less frequent. I do not think that company will upgrade WinXP machines any time soon. With other browsers I have bigger problems on more important sites, so Opera is my choice. Your site is the only one which has Opera (and Maxthon) problems. There are possibly others but they didn’t show yet. It would be nice if you could be able to alternatively allow access without SSL.


I wonder if this all madness is nothing more than a push from the main industry players for people to buy new devices.

I can understand that gmail, a bank, a business or a government website have the strongest encryption available, but does a news website or even a blog website really needs that?
Will the information be more honest and truthful with that security?
And, who will have the motivation and the computational power to spare on messing with a blog, even if it uses weak security?

This is funny, some of the most visited websites in this planet (example: are still on plain http and don’t have plans to change that, but my neighbour was sleepless until she moved her cuisine blog to the latest and strongest https !


Talking about your website: your theme has an issue with iOS mobile. I see articles, press “more”, select one of the “more” articles. When going “back” the homepage is automatically reloaded, starts at the beginning. So I have to click more again to be where I was in the list before.

This is especially cumbersome if I haven’t visited your site for some time and have to do multiple “more”s every time after reading an article.


avra :
I fully understand your position, but that means that I will check your blog much less frequent. I do not think that company will upgrade WinXP machines any time soon.

Your company is still on WinXP?! And you’re allowed to visit Internet with that? Interesting …
I can imagine that WinXP is running on some autonomous system somewhere deep down in a bunker or a factory. I did not know about situations like yours. Can you give more context: big/small company? What kind? Government? Which part of the world? Reasons for not moving? Is your company paying Microsoft the XP-support-money, or is it without support and updates?



Hi Sander!
How much STUPID can you get ??


Sander :
Can you give more context

Eastern Europe, 5000 workers, heavy industry, no payed xp support. Internet is behind firewall. Some software we use works only on WinXP.


using http or https should not be about “speed”, but about being rational.
unless there is a very strong case – and a blog, any blog, does not fit in that – http is the way to go, because of… KISS!
(keep it simple, stupid)
after all, almost we all came here because we are fascinated what can be achieve with these little boards and chips, and all this is about simplicity!!
am I wrong??


@JotaMG :
There are some serious reasons for switching to HTTPS over HTTP, even if your site does not serve critical information. These reasons include SEO, preventing content injection, preventing cookie stealing and becoming a PITA for spy agencies.